CDS

Accession Number TCMCG016C26919
gbkey CDS
Protein Id OMO53583.1
Location complement(join(23114..23249,23357..23604,23804..23878,24125..24325,24453..24560,24949..24999,25104..25154,25340..25411,25549..25662,25752..25902,26206..26320,26550..26633,26744..26867,26952..27033,27162..27223,27371..27424,27512..27778))
Organism Corchorus capsularis
locus_tag CCACVL1_28521

Protein

Length 664aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015161.1
Definition hypothetical protein CCACVL1_28521 [Corchorus capsularis]
Locus_tag CCACVL1_28521

EGGNOG-MAPPER Annotation

COG_category J
Description Pumilio homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14844        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCCAAGAACCAACAAACGCAAAAACCCAAAAAGAGAAAGCAAATATCAAGCGCCAAAGTCGAGCGAGATAGCTCAAAATCCAAGAAGCCGAAGCTCCTTGCCTCCAACCCATCAAAAAATCCTCCAAATAAGCCATTTAAGAAACCTTTCAAATCACCCCAACAGAAACATGGACGACCAAATGATTCAAAGTTTCAGAAATCAGATTCTGGGAATGAAAATAAAGAGCTCTCAAAGCGAGAGCGTCGCCTCCAGGCCAAGGAATTGGCGGAAGCTAGAAAGAAGAAGAGGAAACCACATTATACTCTTGAACAAGAGCTTGCATCCCTCTGGGAAAAGATGAGGCGTCGAAATATTGTTAAAGAAGACCGATCAAAGCTGATAACTGAAGCCCTACAAAAAATGAAGGGAAAGATTCCAGAAATTGCTAGCTCTCATGTTTCTTCTCGTGTTCTGCAGACTTGTGTTAAGTACTGCTCACCAACAGAAAGGGATGCTGTATTTGAGGAGCTTCGTCCGCATCTTCTCACTCTTGCATGCAGTACCTATGCAGTGCATCTGGTGAATAAAATGTTAGATACAGCATCTAAAACACAGCTGGCAGGGATTATCTCCTCTCTCCGAGGCCATGTTGCTTCTCTTCTTCGGCATATGGTTGCGTCTGTAGTTATTGAGCATGCATATCAACTAGGAAATGCCACTCAAAAGCAAGAGCTTCTTATGGAATTATATTCTACAGAGCTTCACCTGTTTAAAGACCTTGCATCTATCAAAGAGAGCAGGTTAATAGATATAATTTCAAGGTTGGACCTGCAGAAATCTTCTGTTTTACGACACATGAGTTCAGTCATTCAACCAATCCTTGAAAAAGGAATAGTTGACCACTCCATGATACACAGGGTGTTAATAGAGTATTTGAGCATAGCCGATAAGTCCTCTGCTGCAGATGTAATTCAACAGCTGTCTGGTCCACTCCTAGTACGAATGATCCATACCCGGGATGGGTCTAAGATTGGGATACTTTGTGTGAAGCATGGGAGTGCAAAGGAAAGAAAGAAAATTATCAAGGGAATGAAAGGCCACATAAGCAAGATAGCTCATGATCAATGTGGGTGCATGGTACTCGTCTGCATTGTTTCAATGGTTGATGACACAAAGCTAATAACAAAGATTATCCTCCGCGAGCTTCAAACAACTTTGAAAGAGATTGCTTTGGACAAGAGTGGAAGGCGATTGTTATTACAGCTGCTTCATCCAAATTATTCACGCTATTTACATCCTGACGATCTGGCTTCTCTAAATTTGTCTGTTCCCTCACTCAGTGATAAGAATGAGTCAGAAGTCAAATCTCAGAATATTTCAAGGGATGAAGAATCAAATGAAGAGGAAGTTGGCAGTGATAACGATATGACAGCTAGTGAGTCTGGTAAAAGTGATACTCCTGCGGAGAGCCTTCACTCAGTTGAGGGTGGGAAGAAGGATCCTTCCTTGAGGAGGAGAGAGTTGCTAATCAGCAGTGGGCTTGCTGAGAAACTTGTTGATGTGTGCATTGAGAATACAGGAGAGTTGCTCAGGTCAAATTTTGGCAAAGAAGTAATTTATGAGGTTGCCATGGGGGGTTCTGATGGTATTCTCCGCCCAAGTTTGGATGAAAAGTTGAATAGCTTGCATGAAGCTATAGCAACACTTGCAGCAAAGGTTAAATCTGAAGAATCTGAGGAAGAACACGTGCTTGAAAATTTCCATTCTAGTCGCACCATAAGGAAACTAGTGTTAGACTGCCCTGCATTTGCTTCCACGTTATGGAAGGAAGCTTTGAAAGGAAAGTGTCAATTGTGGGCGCAGGGTCACAGTTCCAAGGTAGTGTCTGCATTTTGGGAATCCTCAGATTCCAATGTCCGTAAACTGGCAAAAAAAGAGTTGCAGCCCCTGATTGATGGTGGTATACTCAAAATCTCTGAAACTAAACAATCCGGGAATGAAGGTTAA
Protein:  
MAAKNQQTQKPKKRKQISSAKVERDSSKSKKPKLLASNPSKNPPNKPFKKPFKSPQQKHGRPNDSKFQKSDSGNENKELSKRERRLQAKELAEARKKKRKPHYTLEQELASLWEKMRRRNIVKEDRSKLITEALQKMKGKIPEIASSHVSSRVLQTCVKYCSPTERDAVFEELRPHLLTLACSTYAVHLVNKMLDTASKTQLAGIISSLRGHVASLLRHMVASVVIEHAYQLGNATQKQELLMELYSTELHLFKDLASIKESRLIDIISRLDLQKSSVLRHMSSVIQPILEKGIVDHSMIHRVLIEYLSIADKSSAADVIQQLSGPLLVRMIHTRDGSKIGILCVKHGSAKERKKIIKGMKGHISKIAHDQCGCMVLVCIVSMVDDTKLITKIILRELQTTLKEIALDKSGRRLLLQLLHPNYSRYLHPDDLASLNLSVPSLSDKNESEVKSQNISRDEESNEEEVGSDNDMTASESGKSDTPAESLHSVEGGKKDPSLRRRELLISSGLAEKLVDVCIENTGELLRSNFGKEVIYEVAMGGSDGILRPSLDEKLNSLHEAIATLAAKVKSEESEEEHVLENFHSSRTIRKLVLDCPAFASTLWKEALKGKCQLWAQGHSSKVVSAFWESSDSNVRKLAKKELQPLIDGGILKISETKQSGNEG